Transcript: ENST00000692316.1 FAM237B-202

Description

family with sequence similarity 237 member B [Source:HGNC Symbol;Acc:HGNC:53217]

Location

Chromosome 7: 90,316,807-90,321,304 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 3 domains and features, is associated with 1889 variant alleles and maps to 28 oligo probes.

Gene

This transcript is a product of gene ENSG00000283267.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000692316.1	FAM237B-202	3375	139aa	ENSP00000509180.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS94139	A0A1B0GVD1	NM_001384237.2	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENST00000637645.2	FAM237B-201	3873	139aa	ENSP00000490466.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS94139	A0A1B0GVD1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 3,375 bps, Translation length: 139 residues

MANE

This MANE Select transcript contains ENSP00000509180 and matches to NM_001384237.2 and NP_001371166.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: A0A1B0GVD1

CCDS

This transcript is a member of the Human CCDS set: CCDS94139

Version

ENST00000692316.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000692316.1 FAM237B-202

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Transcript: ENST00000692316.1 FAM237B-202

Summary

About Us

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