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Transcript: ENST00000474979.4 LRRC78P-201

Description

leucine rich repeat containing 78, pseudogene [Source:HGNC Symbol;Acc:HGNC:54091]

Gene Synonyms

LINC02618

Location

About this transcript

This transcript has 10 exons, is associated with 29204 variant alleles and maps to 330 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000474979.4	LRRC78P-201	1309	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 10, Coding exons: 0, Transcript length: 1,309 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000474979.4

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

overlaps pseudogene [Definitions]

RNA-Seq supported partial

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.