Transcript: ENST00000565118.2 ABCC6P1-203

Description

ATP binding cassette subfamily C member 6 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:33352]

Location

Chromosome 16: 18,571,162-18,573,539 forward strand.

About this transcript

This transcript has 2 exons, is associated with 1010 variant alleles and maps to 562 oligo probes.

Gene

This transcript is a product of gene ENSG00000291057.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000546162.6	ABCC6P1-202	2943	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000565647.7	ABCC6P1-204	2766	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000701162.1	ABCC6P1-205	2613	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000701691.1	ABCC6P1-206	1375	No protein	-	lncRNA	-	-
ENST00000565118.2	ABCC6P1-203	813	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 813 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000565118.2

Type

LncRNA

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana (TAGENE) manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

overlaps pseudogene [Definitions]

Transcript: ENST00000565118.2 ABCC6P1-203

Summary

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Transcript: ENST00000565118.2 ABCC6P1-203

Summary

About Us

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