Transcript: ENST00000662378.1 LINC01622-204

Description

long intergenic non-protein coding RNA 1622 [Source:HGNC Symbol;Acc:HGNC:27768]

Gene Synonyms

TCONS_00011202

Location

About this transcript

This transcript has 5 exons, is associated with 61806 variant alleles and maps to 247 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000655659.1	LINC01622-202	2213	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENST00000663447.1	LINC01622-205	2465	No protein	-	lncRNA	-	-
ENST00000662378.1	LINC01622-204	2396	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000661526.1	LINC01622-203	2135	No protein	-	lncRNA	-	-
ENST00000664781.1	LINC01622-206	2014	No protein	-	lncRNA	-	-
ENST00000668813.1	LINC01622-207	1945	No protein	-	lncRNA	-	-
ENST00000669177.1	LINC01622-208	1612	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000612554.2	LINC01622-201	1202	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 2,396 bps,

Version

ENST00000662378.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.