Transcript: ENST00000707075.1 OR1B1-202

Description

olfactory receptor family 1 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:8181]

Gene Synonyms

OR9-B

Location

Chromosome 9: 122,628,125-122,657,447 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 23 domains and features, is associated with 11747 variant alleles and maps to 160 oligo probes.

Gene

This transcript is a product of gene ENSG00000280094.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000623530.2	OR1B1-201	1941	317aa	ENSP00000485577.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8NGR6	NM_001004450.3	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000707075.1	OR1B1-202	1929	317aa	ENSP00000516726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A9L9PY52	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 1,929 bps, Translation length: 317 residues

Version

ENST00000707075.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

alternative 5' UTR [Definitions]

RNA-Seq supported partial

upstream ATG

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000707075.1 OR1B1-202

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Transcript: ENST00000707075.1 OR1B1-202

Summary

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