Transcript: ENST00000620186.4 LINC01297-201

Description

long intergenic non-protein coding RNA 1297 [Source:HGNC Symbol;Acc:HGNC:50443]

Location

About this transcript

This transcript has 3 exons, is associated with 22023 variant alleles and maps to 378 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000621052.1	LINC01297-202	4222	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000620186.4	LINC01297-201	258	No protein	-	lncRNA		-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 258 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000620186.4

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

dotter confirmed [Definitions]

QC splicing correct