Transcript: ENST00000588134.1 LINC01415-202

Description

long intergenic non-protein coding RNA 1415 [Source:HGNC Symbol;Acc:HGNC:50709]

Gene Synonyms

TCONS_00026208

Location

About this transcript

This transcript has 2 exons, is associated with 782 variant alleles and maps to 73 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000587320.1	LINC01415-201	4071	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000662428.1	LINC01415-206	3293	No protein	-	lncRNA	-	-
ENST00000656675.1	LINC01415-203	2789	No protein	-	lncRNA	-	-
ENST00000657320.1	LINC01415-204	2306	No protein	-	lncRNA	-	-
ENST00000663960.1	LINC01415-207	1365	No protein	-	lncRNA	-	-
ENST00000657903.1	LINC01415-205	1339	No protein	-	lncRNA	-	-
ENST00000588134.1	LINC01415-202	983	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 983 bps,

Transcript Support Level (TSL)

TSL:4

Version

ENST00000588134.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.