Transcript: ENST00000619899.1 ATP8B1-AS1-203

Description

ATP8B1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:56042]

Gene Synonyms

RP11-35G9.3

Location

Chromosome 18: 57,641,914-57,668,175 forward strand.

About this transcript

This transcript has 2 exons, is associated with 12117 variant alleles and maps to 184 oligo probes.

Gene

This transcript is a product of gene ENSG00000267040.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000592201.1	ATP8B1-AS1-202	1954	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000591854.5	ATP8B1-AS1-201	1106	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000689794.2	ATP8B1-AS1-204	456	No protein	-	lncRNA	-	-
ENST00000619899.1	ATP8B1-AS1-203	309	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 309 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000619899.1

Type

LncRNA

Annotation Method

Long intergenic non-coding RNAs (lincRNAs) were annotated by the Ensembl lincRNA annotation pipeline.

Transcript: ENST00000619899.1 ATP8B1-AS1-203

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000619899.1 ATP8B1-AS1-203

Summary

About Us

Get help

Our sister sites

Follow us