Transcript: ENST00000592653.6 LINC01532-203

Description

long intergenic non-protein coding RNA 1532 [Source:HGNC Symbol;Acc:HGNC:51272]

Location

Chromosome 19: 29,002,319-29,011,796 forward strand.

About this transcript

This transcript has 4 exons, is associated with 4825 variant alleles and maps to 283 oligo probes.

Gene

This transcript is a product of gene ENSG00000267014.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000591143.6	LINC01532-202	3336	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000656059.1	LINC01532-204	2976	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000663054.1	LINC01532-207	1840	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592653.6	LINC01532-203	1589	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000668941.1	LINC01532-209	1134	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000661114.1	LINC01532-206	916	No protein	-	lncRNA	-	-
ENST00000667583.1	LINC01532-208	860	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000659147.1	LINC01532-205	692	No protein	-	lncRNA	-	-
ENST00000589821.1	LINC01532-201	491	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,589 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000592653.6

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000592653.6 LINC01532-203

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Transcript: ENST00000592653.6 LINC01532-203

Summary

About Us

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