Transcript: ENST00000579578.6 PNLIPRP2-201

Description

pancreatic lipase related protein 2 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:9157]

Gene Synonyms

PLRP2

Location

Chromosome 10: 116,620,953-116,645,143 forward strand.

About this transcript

This transcript has 13 exons, is associated with 12282 variant alleles and maps to 429 oligo probes.

Gene

This transcript is a product of gene ENSG00000266200.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000588823.1	PNLIPRP2-203	622	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000586762.2	PNLIPRP2-202	590	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000579578.6	PNLIPRP2-201	1482	469aa	ENSP00000463502.4	Protein coding LoF	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 1,482 bps, Translation length: 469 residues

Transcript Support Level (TSL)

TSL:2

Version

ENST00000579578.6

Type

Protein coding LoF

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000579578.6 PNLIPRP2-201

Summary

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Transcript: ENST00000579578.6 PNLIPRP2-201

Summary

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