Transcript: ENST00000587305.1 LINC02210-CRHR1-201

Description

LINC02210-CRHR1 readthrough [Source:HGNC Symbol;Acc:HGNC:51483]

Location

Chromosome 17: 45,621,926-45,816,487 forward strand.

About this transcript

This transcript has 5 exons, is associated with 77608 variant alleles and maps to 198 oligo probes.

Gene

This transcript is a product of gene ENSG00000263715.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000634540.1	LINC02210-CRHR1-202	2695	240aa	ENSP00000488912.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A024R9X9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000587305.1	LINC02210-CRHR1-201	560	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 560 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000587305.1

Type

Protein coding CDS not defined

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

dotter confirmed [Definitions]

Transcript: ENST00000587305.1 LINC02210-CRHR1-201

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Transcript: ENST00000587305.1 LINC02210-CRHR1-201

Summary

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