Transcript: ENST00000566649.1 LINC02140-202

Description

long intergenic non-protein coding RNA 2140 [Source:HGNC Symbol;Acc:HGNC:53000]

Location

Chromosome 16: 54,366,007-54,370,665 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 2174 variant alleles and maps to 165 oligo probes.

Gene

This transcript is a product of gene ENSG00000261803.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000661222.1	LINC02140-204	2157	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000660155.1	LINC02140-203	2049	No protein	-	lncRNA	-	-
ENST00000566649.1	LINC02140-202	2017	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000668085.1	LINC02140-205	1822	No protein	-	lncRNA	-	-
ENST00000669832.1	LINC02140-206	1410	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000562614.1	LINC02140-201	427	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,017 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000566649.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000566649.1 LINC02140-202

Summary

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Transcript: ENST00000566649.1 LINC02140-202

Summary

About Us

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