Transcript: ENST00000644747.1 FRRS1L-205

Description

ferric chelate reductase 1 like [Source:HGNC Symbol;Acc:HGNC:1362]

Gene Synonyms

C9ORF4, CG-6

Location

Chromosome 9: 109,137,446-109,167,003 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 1 domain and feature, is associated with 12494 variant alleles and maps to 256 oligo probes.

Gene

This transcript is a product of gene ENSG00000260230.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000561981.5	FRRS1L-201	8155	293aa	ENSP00000477141.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35098	Q9P0K9	NM_014334.4	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000644736.1	FRRS1L-204	711	8aa	ENSP00000494579.1	Nonsense mediated decay		A0A2R8YDG8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000644747.1	FRRS1L-205	671	53aa	ENSP00000493964.1	Nonsense mediated decay		A0A2R8Y4E4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000642299.1	FRRS1L-203	445	35aa	ENSP00000495137.1	Nonsense mediated decay		A0A2R8Y5Y6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000645180.1	FRRS1L-206	5146	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000642157.1	FRRS1L-202	3497	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 671 bps, Translation length: 53 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000644747.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]

Transcript: ENST00000644747.1 FRRS1L-205

Summary

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Transcript: ENST00000644747.1 FRRS1L-205

Summary

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