Transcript: ENST00000553181.6 ODC1-DT-203

Description

ODC1 divergent transcript [Source:HGNC Symbol;Acc:HGNC:54070]

Gene Synonyms

LNCRNA-MIF

Location

Chromosome 2: 10,448,689-10,457,692 forward strand.

About this transcript

This transcript has 4 exons, is associated with 4044 variant alleles and maps to 324 oligo probes.

Gene

This transcript is a product of gene ENSG00000257135.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000553181.6	ODC1-DT-203	4242	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000670859.1	ODC1-DT-205	2532	No protein	-	lncRNA	-	-
ENST00000667698.1	ODC1-DT-204	2457	No protein	-	lncRNA	-	-
ENST00000547349.2	ODC1-DT-202	1259	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000684902.1	ODC1-DT-206	895	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000702529.1	ODC1-DT-208	881	No protein	-	lncRNA	-	-
ENST00000690575.1	ODC1-DT-207	582	No protein	-	lncRNA	-	-
ENST00000404616.2	ODC1-DT-201	494	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 4,242 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000553181.6

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000553181.6 ODC1-DT-203

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Transcript: ENST00000553181.6 ODC1-DT-203

Summary

About Us

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