Transcript: ENST00000531749.1 LINC02548-201

Description

long intergenic non-protein coding RNA 2548 [Source:HGNC Symbol;Acc:HGNC:53583]

Location

About this transcript

This transcript has 3 exons, is associated with 31149 variant alleles and maps to 94 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000664710.1	LINC02548-207	1235	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000648524.1	LINC02548-202	1455	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000655777.1	LINC02548-204	1445	No protein	-	lncRNA	-	-
ENST00000668428.1	LINC02548-208	1122	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000659648.1	LINC02548-206	1060	No protein	-	lncRNA	-	-
ENST00000657797.1	LINC02548-205	1016	No protein	-	lncRNA	-	-
ENST00000655374.1	LINC02548-203	860	No protein	-	lncRNA	-	-
ENST00000531749.1	LINC02548-201	484	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 484 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000531749.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.