Transcript: ENST00000525941.1 GATD1-DT-201

Description

GATD1 divergent transcript [Source:HGNC Symbol;Acc:HGNC:29907]

Location

Chromosome 11: 777,608-784,297 forward strand.

About this transcript

This transcript has 4 exons, is associated with 3921 variant alleles and maps to 108 oligo probes.

Gene

This transcript is a product of gene ENSG00000255284.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000530083.3	GATD1-DT-203	1824	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000655766.1	GATD1-DT-204	717	No protein	-	lncRNA	-	-
ENST00000525941.1	GATD1-DT-201	610	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000701716.1	GATD1-DT-205	521	No protein	-	lncRNA	-	-
ENST00000526588.1	GATD1-DT-202	291	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 610 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000525941.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000525941.1 GATD1-DT-201

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Transcript: ENST00000525941.1 GATD1-DT-201

Summary

About Us

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