Transcript: ENST00000508879.5 LINC02200-202

Description

long intergenic non-protein coding RNA 2200 [Source:HGNC Symbol;Acc:HGNC:53066]

Gene Synonyms

RP11-159K7.2

Location

Chromosome 5: 112,628,436-112,632,100 forward strand.

About this transcript

This transcript has 4 exons, is associated with 1641 variant alleles and maps to 156 oligo probes.

Gene

This transcript is a product of gene ENSG00000250358.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000690425.1	LINC02200-207	774	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENST00000667476.1	LINC02200-206	3203	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000653123.1	LINC02200-204	2059	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000663305.1	LINC02200-205	1310	No protein	-	lncRNA	-	-
ENST00000513687.2	LINC02200-203	1098	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000507565.2	LINC02200-201	754	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000508879.5	LINC02200-202	615	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 615 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000508879.5

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000508879.5 LINC02200-202

Summary

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Transcript: ENST00000508879.5 LINC02200-202

Summary

About Us

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