Transcript: ENST00000505196.1 LINC01194-201

Description

long intergenic non-protein coding RNA 1194 [Source:HGNC Symbol;Acc:HGNC:37171]

Gene Synonyms

CT49, TAG

Location

Chromosome 5: 12,574,857-12,804,363 forward strand.

About this transcript

This transcript has 4 exons, is associated with 104586 variant alleles and maps to 168 oligo probes.

Gene

This transcript is a product of gene ENSG00000248131.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000505196.1	LINC01194-201	540	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000513051.6	LINC01194-203	1844	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000505877.5	LINC01194-202	1319	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000664069.1	LINC01194-205	1262	No protein	-	lncRNA	-	-
ENST00000658959.1	LINC01194-204	1103	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 540 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000505196.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000505196.1 LINC01194-201

Summary

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Transcript: ENST00000505196.1 LINC01194-201

Summary

About Us

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