Transcript: ENST00000449954.2 LINC01961-201

Description

long intergenic non-protein coding RNA 1961 [Source:HGNC Symbol;Acc:HGNC:52786]

Location

About this transcript

This transcript has 3 exons, is associated with 1679 variant alleles and maps to 372 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000449954.2	LINC01961-201	989	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000671438.1	LINC01961-203	1698	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000668674.1	LINC01961-202	823	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 989 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000449954.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

not best-in-genome evidence [Definitions]

QC splicing correct