Transcript: ENST00000670559.1 LINC01422-206

Description

long intergenic non-protein coding RNA 1422 [Source:HGNC Symbol;Acc:HGNC:50728]

Location

About this transcript

This transcript has 4 exons, is associated with 51652 variant alleles and maps to 45 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000670559.1	LINC01422-206	1484	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434868.1	LINC01422-201	6043	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000653531.1	LINC01422-202	2395	No protein	-	lncRNA	-	-
ENST00000671424.1	LINC01422-207	1697	No protein	-	lncRNA	-	-
ENST00000664041.1	LINC01422-204	1483	No protein	-	lncRNA	-	-
ENST00000658323.1	LINC01422-203	1269	No protein	-	lncRNA	-	-
ENST00000664057.1	LINC01422-205	1181	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,484 bps,

Version

ENST00000670559.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.