Transcript: ENST00000448049.1 LINC00319-202

Description

long intergenic non-protein coding RNA 319 [Source:HGNC Symbol;Acc:HGNC:19730]

Gene Synonyms

C21ORF125, FLJ38036, NCRNA00319, PRED49

Location

About this transcript

This transcript has 4 exons, is associated with 1128 variant alleles and maps to 338 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000448049.1	LINC00319-202	3507	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000651768.1	LINC00319-203	3164	No protein	-	lncRNA	-	-
ENST00000342757.3	LINC00319-201	3013	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000701366.1	LINC00319-204	493	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 3,507 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000448049.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.