Transcript: ENST00000649986.1 SPATA8-204

Description

spermatogenesis associated 8 [Source:HGNC Symbol;Acc:HGNC:28676]

Gene Synonyms

MGC44294, SRG8

Location

Chromosome 15: 96,783,389-96,785,615 forward strand.

About this transcript

This transcript has 3 exons, is associated with 1285 variant alleles and maps to 280 oligo probes.

Gene

This transcript is a product of gene ENSG00000185594.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000560327.1	SPATA8-202	1386	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000649986.1	SPATA8-204	1083	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENST00000671619.1	SPATA8-205	1436	No protein	-	lncRNA	-	-
ENST00000561002.2	SPATA8-203	1115	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000558553.2	SPATA8-201	899	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,083 bps,

Version

ENST00000649986.1

Type

LncRNA

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENST00000649986.1 SPATA8-204

Summary

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Transcript: ENST00000649986.1 SPATA8-204

Summary

About Us

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