Transcript: ENST00000684634.1 KLHL38-202

Description

kelch like family member 38 [Source:HGNC Symbol;Acc:HGNC:34435]

Gene Synonyms

C8ORFK36

Location

Chromosome 8: 123,644,442-123,653,801 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 24 domains and features, is associated with 4857 variant alleles and maps to 168 oligo probes.

Gene

This transcript is a product of gene ENSG00000175946.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000684634.1	KLHL38-202	3260	581aa	ENSP00000508228.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43766	Q2WGJ6	NM_001081675.3	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENST00000325995.7	KLHL38-201	1982	581aa	ENSP00000321475.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43766	Q2WGJ6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 3,260 bps, Translation length: 581 residues

MANE

This MANE Select transcript contains ENSP00000508228 and matches to NM_001081675.3 and NP_001075144.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q2WGJ6

CCDS

This transcript is a member of the Human CCDS set: CCDS43766

Version

ENST00000684634.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000684634.1 KLHL38-202

Summary

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Transcript: ENST00000684634.1 KLHL38-202

Summary

About Us

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