Transcript: ENST00000556794.5 FAM161B-202

Description

FAM161 centrosomal protein B [Source:HGNC Symbol;Acc:HGNC:19854]

Gene Synonyms

C14ORF44, FLJ31697

Location

Chromosome 14: 73,931,501-73,938,094 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 2810 variant alleles and maps to 140 oligo probes.

Gene

This transcript is a product of gene ENSG00000156050.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000286544.5	FAM161B-201	3992	647aa	ENSP00000286544.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9822	Q96MY7-1	NM_152445.3	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000651776.1	FAM161B-203	3592	710aa	ENSP00000499021.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96MY7-2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556794.5	FAM161B-202	1365	144aa	ENSP00000450889.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YJ62	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,365 bps, Translation length: 144 residues

Transcript Support Level (TSL)

TSL:3

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000556794.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000556794.5 FAM161B-202

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Transcript: ENST00000556794.5 FAM161B-202

Summary

About Us

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