Transcript: ENST00000675730.1 CPB2-204

Description

carboxypeptidase B2 [Source:HGNC Symbol;Acc:HGNC:2300]

Gene Synonyms

CPU, PCPB, TAFI

Location

Chromosome 13: 46,053,217-46,105,028 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 1 domain and feature, is associated with 20421 variant alleles and maps to 412 oligo probes.

Gene

This transcript is a product of gene ENSG00000080618.17 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000181383.10	CPB2-201	1724	423aa	ENSP00000181383.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9401	Q96IY4-1	NM_001872.5	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000674625.1	CPB2-203	5585	207aa	ENSP00000502808.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A6Q8PHS9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439329.5	CPB2-202	1577	386aa	ENSP00000400714.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS73568	A0A087WSY5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000675730.1	CPB2-204	1483	220aa	ENSP00000502038.1	Nonsense mediated decay		A0A6Q8PG06	-	-

Summary

Statistics

Exons: 9, Coding exons: 7, Transcript length: 1,483 bps, Translation length: 220 residues

Version

ENST00000675730.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000675730.1 CPB2-204

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Transcript: ENST00000675730.1 CPB2-204

Summary

About Us

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