Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: KCNIP1 ENSSSCG00000017003

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Description

potassium voltage-gated channel interacting protein 1 [Source:VGNC Symbol;Acc:VGNC:89348]

Location

Primary_assembly 16: 53,267,523-53,653,730 reverse strand.

Sscrofa11.1:CM000827.5

About this gene

This gene has 5 transcripts (splice variants), 276 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000081283.2	KCNIP1-202	6685	232aa	ENSSSCP00000068818.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1U930 A0A5G2QVE3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000086608.2	KCNIP1-203	6845	225aa	ENSSSCP00000072056.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1U9M2 A0A5G2R4P8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000085014.2	KCNIP1-204	6838	216aa	ENSSSCP00000059781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1U714 Q5BMD3	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000059673.3	KCNIP1-205	6752	227aa	ENSSSCP00000052291.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B750 A0A4X1U926	-
ENSSSCT00000018515.4	KCNIP1-201	630	209aa	ENSSSCP00000018015.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5K1VE90 A0A8D1XQB9	-

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Summary

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