Gene: Gfi1 ENSMUSG00000029275

Description

growth factor independent 1 transcription repressor [Source:MGI Symbol;Acc:MGI:103170]

Gene Synonyms

Gfi-1, Pal-1, Pal1

Location

Chromosome 5: 107,864,523-107,873,902 reverse strand.

GRCm39:CM000998.3

About this gene

This gene has 4 transcripts (splice variants), 207 orthologues, 25 paralogues and is associated with 64 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000065478.12	Gfi1-202	2639	489aa	ENSMUSP00000135039.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59680	H3BJM0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000031205.16	Gfi1-201	2860	423aa	ENSMUSP00000135884.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS57371	A0A0R4J292	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000159164.9	Gfi1-203	2648	423aa	ENSMUSP00000137229.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS57371	A0A0R4J292	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000159263.3	Gfi1-204	689	186aa	ENSMUSP00000135880.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BLQ9	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,