Human (GRCh38.p14)
Description

shugoshin 1 [Source:HGNC Symbol;Acc:HGNC:25088]

Gene Synonyms

NY-BR-85, SGOL1

Location
About this transcript

This transcript has 8 exons, is annotated with 18 domains and features, is associated with 7605 variant alleles and maps to 409 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000412997.6SGO1-2033070527aaENSP00000410458.1
 
Protein coding
CCDS46773Q5FBB7-6 NM_001199251.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENST00000263753.8SGO1-2012338561aaENSP00000263753.4
 
Protein coding
CCDS33716Q5FBB7-1 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000442720.5SGO1-2092266258aaENSP00000394957.1
 
Protein coding
CCDS46772Q5FBB7-5 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000421451.5SGO1-2061969561aaENSP00000414129.1
 
Protein coding
CCDS33716Q5FBB7-1 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000419233.6SGO1-2051582309aaENSP00000394625.2
 
Protein coding
CCDS46771Q5FBB7-2 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000306698.6SGO1-2021531292aaENSP00000306581.2
 
Protein coding
CCDS2635Q5FBB7-3 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000425061.5SGO1-2071213309aaENSP00000414960.1
 
Protein coding
CCDS46771Q5FBB7-2 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000437051.5SGO1-2081187275aaENSP00000389034.1
 
Protein coding
CCDS46774Q5FBB7-4 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000452020.5SGO1-2111162292aaENSP00000411200.1
 
Protein coding
CCDS2635Q5FBB7-3 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000417364.1SGO1-2041075275aaENSP00000394613.1
 
Protein coding
CCDS46774Q5FBB7-4 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000443724.5SGO1-210931215aaENSP00000413070.1
 
Protein coding
CCDS56243Q5FBB7-7 -GENCODE basicTSL:1
ENST00000456624.1SGO1-21266384aaENSP00000397672.1
 
Nonsense mediated decay
F8WB17 -TSL:5
ENST00000460637.1SGO1-213980No protein-
 
Protein coding CDS not defined
--TSL:2
Statistics

Exons: 8, Coding exons: 7, Transcript length: 3,070 bps, Translation length: 527 residues

MANE

This MANE Select transcript contains ENSP00000410458 and matches to NM_001199251.3 and NP_001186180.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5FBB7

CCDS

This transcript is a member of the Human CCDS set: CCDS46773

Transcript Support Level (TSL)

TSL:1

Version

ENST00000412997.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.