Human (GRCh38.p14)
Description

methyl-CpG binding domain protein 1 [Source:HGNC Symbol;Acc:HGNC:6916]

Gene Synonyms

CXXC3, PCM1

Location

Chromosome 18: 50,266,882-50,281,774 reverse strand.

GRCh38:CM000680.2

About this gene

This gene has 28 transcripts (splice variants), 192 orthologues and 8 paralogues.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000269468.10MBD1-2013009605aaENSP00000269468.5
 
Protein coding
CCDS11943Q9UIS9-1 NM_015846.4MANE SelectEnsembl CanonicalGENCODE basicTSL:5
ENST00000591416.5MBD1-2244905605aaENSP00000467017.1
 
Protein coding
CCDS11943Q9UIS9-1 -GENCODE basicTSL:5
ENST00000347968.7MBD1-2043091549aaENSP00000285102.5
 
Protein coding
CCDS11942Q9UIS9-7 -GENCODE basicTSL:1
ENST00000269471.9MBD1-2022980586aaENSP00000269471.5
 
Protein coding
CCDS32832Q9UIS9-2 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000339998.10MBD1-2032956550aaENSP00000339546.5
 
Protein coding
CCDS56072Q9UIS9-6 -GENCODE basicTSL:1
ENST00000590208.5MBD1-2222913655aaENSP00000468785.1
 
Protein coding
CCDS59320Q9UIS9-12 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000353909.7MBD1-2052820556aaENSP00000269469.5
 
Protein coding
CCDS11944Q9UIS9-5 -GENCODE basicTSL:1
ENST00000705655.1MBD1-2282708680aaENSP00000516153.1
 
Protein coding
CCDS92462A0A994J7H0 -GENCODE basicAPPRIS ALT2
ENST00000585672.5MBD1-2122532567aaENSP00000466092.1
 
Protein coding
CCDS59318Q9UIS9-10 -GENCODE basicTSL:1
ENST00000457839.6MBD1-2102473630aaENSP00000405268.2
 
Protein coding
CCDS56073Q9UIS9-9 -GENCODE basicAPPRIS P4TSL:2
ENST00000382948.9MBD1-2062434605aaENSP00000372407.5
 
Protein coding
CCDS11943Q9UIS9-1 -GENCODE basicTSL:2
ENST00000585595.5MBD1-2112179630aaENSP00000468430.1
 
Protein coding
CCDS56073Q9UIS9-9 -GENCODE basicAPPRIS P4TSL:2
ENST00000398495.6MBD1-2092178566aaENSP00000381508.2
 
Protein coding
A0A0A0MS90 -GENCODE basicTSL:5
ENST00000592060.5MBD1-2271952416aaENSP00000467606.1
 
Protein coding
K7EPZ6 -TSL:1CDS 5' incomplete
ENST00000587605.5MBD1-2161945535aaENSP00000468042.1
 
Protein coding
CCDS59319Q9UIS9-11 -GENCODE basicTSL:2
ENST00000398493.5MBD1-2081845549aaENSP00000381506.1
 
Protein coding
CCDS11942Q9UIS9-7 -GENCODE basicTSL:5
ENST00000588937.5MBD1-2171761586aaENSP00000467763.1
 
Protein coding
CCDS32832Q9UIS9-2 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000591535.5MBD1-2251611536aaENSP00000465923.1
 
Protein coding
CCDS56071Q9UIS9-8 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000398488.5MBD1-2071512503aaENSP00000381502.1
 
Protein coding
CCDS11941Q9UIS9-4 -GENCODE basicTSL:1
ENST00000589541.5MBD1-218836240aaENSP00000466806.1
 
Protein coding
K7EN65 -TSL:3CDS 5' incomplete
ENST00000589733.1MBD1-219767256aaENSP00000466429.1
 
Protein coding
K7EMA9 -TSL:2CDS 5' and 3' incomplete
ENST00000590215.1MBD1-22374944aaENSP00000464823.1
 
Nonsense mediated decay
K7EIN3 -TSL:5
ENST00000586118.5MBD1-2131012No protein-
 
Retained intron
--TSL:3
ENST00000589867.2MBD1-221673No protein-
 
Retained intron
--TSL:3
ENST00000586679.1MBD1-214533No protein-
 
Retained intron
--TSL:3
ENST00000586884.1MBD1-215514No protein-
 
Retained intron
--TSL:3
ENST00000591661.1MBD1-226482No protein-
 
Retained intron
--TSL:3
ENST00000589758.1MBD1-220385No protein-
 
Retained intron
--TSL:1