Human (GRCh38.p14)
Description

VPS39 subunit of HOPS complex [Source:HGNC Symbol;Acc:HGNC:20593]

Gene Synonyms

KIAA0770, VAM6

Location

Chromosome 15: 42,158,701-42,208,307 reverse strand.

GRCh38:CM000677.2

About this gene

This gene has 14 transcripts (splice variants), 209 orthologues and 1 paralogue.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000318006.10VPS39-2014832875aaENSP00000326534.5
 
Protein coding
CCDS10083Q96JC1-2 NM_015289.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENST00000348544.4VPS39-2022661886aaENSP00000335193.5
 
Protein coding
CCDS73710Q96JC1-1 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000564994.5VPS39-20862947aaENSP00000457325.1
 
Nonsense mediated decay
H3BTU0 -TSL:3CDS 5' incomplete
ENST00000568357.1VPS39-210593No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000563692.1VPS39-207587No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000562258.5VPS39-2054160No protein-
 
Retained intron
--TSL:2
ENST00000614932.1VPS39-2142835No protein-
 
Retained intron
--TSL:NA
ENST00000570062.1VPS39-213842No protein-
 
Retained intron
--TSL:3
ENST00000568029.5VPS39-209791No protein-
 
Retained intron
--TSL:5
ENST00000568755.1VPS39-211581No protein-
 
Retained intron
--TSL:3
ENST00000561797.1VPS39-203545No protein-
 
Retained intron
--TSL:3
ENST00000561818.1VPS39-204537No protein-
 
Retained intron
--TSL:3
ENST00000562662.1VPS39-206526No protein-
 
Retained intron
--TSL:4
ENST00000570023.1VPS39-212337No protein-
 
Retained intron
--TSL:3