Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TMEM65 ENSG00000164983

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Description

transmembrane protein 65 [Source:HGNC Symbol;Acc:HGNC:25203]

Location

Chromosome 8: 124,306,189-124,372,701 reverse strand.

GRCh38:CM000670.2

About this gene

This gene has 7 transcripts (splice variants) and 243 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000297632.8	TMEM65-201	9038	240aa	ENSP00000297632.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6348	Q6PI78	NM_194291.3	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000704783.1	TMEM65-202	2052	225aa	ENSP00000516032.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A994J4W9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000704786.1	TMEM65-205	1281	105aa	ENSP00000516034.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A994J4P3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000704788.1	TMEM65-207	532	102aa	ENSP00000516035.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A994J794	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000704785.1	TMEM65-204	2748	176aa	ENSP00000516033.1	Nonsense mediated decay		A0A994J7M8	-	-
ENST00000704784.1	TMEM65-203	3727	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000704787.1	TMEM65-206	1261	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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