Human (GRCh38.p14)
Description

SMG1 nonsense mediated mRNA decay associated PI3K related kinase [Source:HGNC Symbol;Acc:HGNC:30045]

Gene Synonyms

ATX, KIAA0421, LIP

Location

Chromosome 16: 18,804,860-18,926,408 reverse strand.

GRCh38:CM000678.2

About this gene

This gene has 16 transcripts (splice variants), 219 orthologues and 5 paralogues.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000446231.7SMG1-201160623661aaENSP00000402515.3
 
Protein coding
CCDS45430Q96Q15-1 NM_015092.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000565324.5SMG1-210124653551aaENSP00000456259.1
 
Protein coding
J3KRA9 -TSL:1CDS 5' incomplete
ENST00000563235.5SMG1-2062910853aaENSP00000455861.2
 
Protein coding
H3BQN7 -TSL:2CDS 5' incomplete
ENST00000561947.5SMG1-2042664551aaENSP00000460854.1
 
Protein coding
I3L400 -TSL:5CDS 5' incomplete
ENST00000565224.5SMG1-2092372607aaENSP00000458380.1
 
Protein coding
I3L0W2 -GENCODE basicTSL:5
ENST00000532700.6SMG1-2021259335aaENSP00000432825.2
 
Protein coding
E9PNP6 -TSL:2CDS 3' incomplete
ENST00000563836.1SMG1-20856556aaENSP00000456025.1
 
Protein coding
H3BR09 -TSL:5CDS 3' incomplete
ENST00000569122.1SMG1-21556262aaENSP00000455453.2
 
Protein coding
H3BPS6 -TSL:5CDS 3' incomplete
ENST00000566328.2SMG1-21155085aaENSP00000484278.1
 
Protein coding
A0A087X1K8 -TSL:5CDS 5' incomplete
ENST00000568038.1SMG1-2131210321aaENSP00000458558.1
 
Nonsense mediated decay
I3L144 -TSL:2CDS 5' incomplete
ENST00000567737.1SMG1-212721No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000569764.1SMG1-2164187No protein-
 
Retained intron
--TSL:5
ENST00000568239.1SMG1-2142978No protein-
 
Retained intron
--TSL:1
ENST00000563448.1SMG1-2072016No protein-
 
Retained intron
--TSL:2
ENST00000561940.1SMG1-203964No protein-
 
Retained intron
--TSL:2
ENST00000562668.1SMG1-205449No protein-
 
Retained intron
--TSL:3