Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SLC39A13-AS1 ENSG00000255197

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Description

SLC39A13 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:56351]

Gene Synonyms

AC090559.1

Location

Chromosome 11: 47,381,509-47,409,369 reverse strand.

GRCh38:CM000673.2

About this gene

This gene has 8 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000666926.1	SLC39A13-AS1-206	2732	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENST00000655367.2	SLC39A13-AS1-204	2636	No protein	-	lncRNA		-	-
ENST00000691591.1	SLC39A13-AS1-208	2635	No protein	-	lncRNA		-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000689628.1	SLC39A13-AS1-207	2393	No protein	-	lncRNA		-	-
ENST00000532340.2	SLC39A13-AS1-202	2374	No protein	-	lncRNA		-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000659838.2	SLC39A13-AS1-205	2329	No protein	-	lncRNA		-	-
ENST00000532943.5	SLC39A13-AS1-203	851	No protein	-	lncRNA		-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000527426.1	SLC39A13-AS1-201	836	No protein	-	lncRNA		-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

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Summary

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