Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: LINC02682 ENSG00000254661

.

Description

long intergenic non-protein coding RNA 2682 [Source:HGNC Symbol;Acc:HGNC:54177]

Gene Synonyms

LNC-SOX6-1, TCONS_00019584

Location

Chromosome 11: 15,910,528-15,930,951 forward strand.

GRCh38:CM000673.2

About this gene

This gene has 13 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000664116.1	LINC02682-204	1066	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000668376.1	LINC02682-209	1587	No protein	-	lncRNA		-	-
ENST00000667221.1	LINC02682-208	1377	No protein	-	lncRNA		-	-
ENST00000669725.1	LINC02682-211	1372	No protein	-	lncRNA		-	-
ENST00000670509.1	LINC02682-213	1361	No protein	-	lncRNA		-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000664817.1	LINC02682-205	1317	No protein	-	lncRNA		-	-
ENST00000530418.2	LINC02682-201	1079	No protein	-	lncRNA		-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000670379.1	LINC02682-212	1025	No protein	-	lncRNA		-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000663478.1	LINC02682-203	967	No protein	-	lncRNA		-	-
ENST00000668712.1	LINC02682-210	953	No protein	-	lncRNA		-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000664884.1	LINC02682-206	875	No protein	-	lncRNA		-	-
ENST00000662912.1	LINC02682-202	820	No protein	-	lncRNA		-	-
ENST00000666053.1	LINC02682-207	790	No protein	-	lncRNA		-	-

.

Summary

.

.