Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LINC01649 ENSG00000228127

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Description

long intergenic non-protein coding RNA 1649 [Source:HGNC Symbol;Acc:HGNC:52436]

Location

Chromosome 1: 115,904,855-115,931,616 forward strand.

GRCh38:CM000663.2

About this gene

This gene has 7 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000659309.1	LINC01649-203	1526	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENST00000659738.1	LINC01649-204	1840	No protein	-	lncRNA		-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000671350.1	LINC01649-207	1765	No protein	-	lncRNA		-	-
ENST00000634255.2	LINC01649-202	1761	No protein	-	lncRNA		-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000669586.1	LINC01649-206	1732	No protein	-	lncRNA		-	-
ENST00000438885.3	LINC01649-201	1658	No protein	-	lncRNA		-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000665767.1	LINC01649-205	1460	No protein	-	lncRNA		-	-

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Summary

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