Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LCAL1 ENSG00000286042

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Description

lung cancer associated lncRNA 1 [Source:HGNC Symbol;Acc:HGNC:25837]

Gene Synonyms

ONCO-LNCRNA-27

Location

Chromosome 6: 79,307,669-79,313,384 reverse strand.

GRCh38:CM000668.2

About this gene

This gene has 3 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000651663.1	LCAL1-202	3885	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000651762.1	LCAL1-203	830	No protein	-	lncRNA		-	-
ENST00000651107.1	LCAL1-201	547	No protein	-	lncRNA		-	-

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Summary

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