Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CASC22 ENSG00000260887

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Description

cancer susceptibility 22 [Source:HGNC Symbol;Acc:HGNC:50627]

Gene Synonyms

LINC01373, LINCRNA-ENST00000515084, TCONS_00024290

Location

Chromosome 16: 52,258,564-52,280,638 forward strand.

GRCh38:CM000678.2

About this gene

This gene has 12 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000569713.1	CASC22-201	386	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000668506.1	CASC22-210	1353	No protein	-	lncRNA		-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000665777.1	CASC22-209	1243	No protein	-	lncRNA		-	-
ENST00000656784.1	CASC22-204	848	No protein	-	lncRNA		-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000653084.1	CASC22-203	823	No protein	-	lncRNA		-	-
ENST00000661626.1	CASC22-206	814	No protein	-	lncRNA		-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000628396.1	CASC22-202	802	No protein	-	lncRNA		-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000668976.1	CASC22-211	785	No protein	-	lncRNA		-	-
ENST00000662008.1	CASC22-208	781	No protein	-	lncRNA		-	-
ENST00000670500.1	CASC22-212	750	No protein	-	lncRNA		-	-
ENST00000660275.1	CASC22-205	642	No protein	-	lncRNA		-	-
ENST00000661876.1	CASC22-207	535	No protein	-	lncRNA		-	-

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Summary

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