Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATXN1-AS1 ENSG00000229931

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Description

ATXN1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40515]

Gene Synonyms

AL137003.1

Location

Chromosome 6: 16,761,138-16,763,947 forward strand.

GRCh38:CM000668.2

About this gene

This gene has 7 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000692306.2	ATXN1-AS1-205	1913	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000689080.1	ATXN1-AS1-204	1711	No protein	-	lncRNA		-	-
ENST00000693115.2	ATXN1-AS1-206	1617	No protein	-	lncRNA		-	-
ENST00000685689.1	ATXN1-AS1-203	1243	No protein	-	lncRNA		-	-
ENST00000450930.2	ATXN1-AS1-202	1032	No protein	-	lncRNA		-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000701248.1	ATXN1-AS1-207	800	No protein	-	lncRNA		-	-
ENST00000423260.1	ATXN1-AS1-201	491	No protein	-	lncRNA		-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

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Summary

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